| Common name: | PUS18 |
| Defline: | TruB family RNA pseudouridine synthase; (1 of 1) K03177 - tRNA pseudouridine55 synthase [EC:5.4.99.25] (truB, PUS4, TRUB1) |
| Description: | |
| Synonyms: | g16202.t1,Cre16.g690250.t1.1,PUS18 |
| Chromosome: | chromosome 16 |
We did not create a plasmid for this gene.
We did not determine any protein-protein interactions for this gene.
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.009100_1 | CLIP2.009100 | intron | 80 | 6.1 |
| CLIP2.029188_1 | CLIP2.029188 | intron | 80 | 6.1 |
| CLIP2.029188_2 | CLIP2.029188 | intron | 80 | 6.1 |
| CLIP2.045779_1 | CLIP2.045779 | intron | 80 | 6.1 |
| CLIP2.060948_1 | CLIP2.060948 | 5'UTR | 80 | 6.1 |
| CLIP2.060948_2 | CLIP2.060948 | 5'UTR | 80 | 6.1 |
| CLIP2.063206_1 | CLIP2.063206 | intron | 63 | 6.1 |
| CLIP2.069348_1 | CLIP2.069348 | 5'UTR | 80 | 6.1 |
| CLIP2.069348_2 | CLIP2.069348 | 5'UTR | 80 | 6.1 |
| LMJ.RY0402.088487_2 | LMJ.RY0402.088487 | CDS | 95 | 5.5 |
| LMJ.RY0402.088487_3 | LMJ.RY0402.088487 | intron | 95 | 5.5 |
| LMJ.RY0402.161869_1 | LMJ.RY0402.161869 | CDS | 95 | 5.5 |
| LMJ.RY0402.161869_2 | LMJ.RY0402.161869 | CDS | 95 | 5.5 |
| LMJ.RY0402.239030_1 | LMJ.RY0402.239030 | intron | 58 | 5.5 |
| LMJ.RY0402.247480_1 | LMJ.RY0402.247480 | intron | 73 | 5.5 |
| PFAM: | PF01509, PF16198 |
| PANTHER: | PTHR13767 PTHR13767:SF2 |
| KEGG_ec: | EC:5.4.99.25 |
| KEGG_orthology: | K03177 |
| KOG: | |
| Gene ontology terms:: | GO:0001522, GO:0003723, GO:0006396, GO:0009451, GO:0009982 |
| Best arabidopsis TAIR name: | AT5G14460.1 |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | Pseudouridine synthase family protein |
| Phytozome Locus Page |
Our phenotype screens did not find statistically significant results for this gene.