Insertion junction: CLIP2.069348_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.069348
Chromosome:chromosome 16
Location:4049253
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g690250 PUS18 TruB family RNA pseudouridine synthase; (1 of 1) K03177 - tRNA pseudouridine55 synthase [EC:5.4.99.25] (truB, PUS4, TRUB1) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTGCAATCGGGCCATGACTTGGTTGCTGAGTTAGGGCTCATGCAAGCT
Internal bar code:TCCGCGGTGGGTGAGAACGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:4327
LEAP-Seq percent confirming:98.6487
LEAP-Seq n confirming:73
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:74

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTCTGTTAGTGGCGAAGG
Suggested primer 2:ACGGCAGCAGCTAAAGGAAT