Insertion junction: CLIP2.009169_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.009169
Chromosome:chromosome 9
Location:2121061
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g396000 NAR5,NRT2C Nitrate/nitrite transporter; (1 of 4) K02575 - MFS transporter, NNP family, nitrate/nitrite transporter (NRT, narK, nrtP, nasA) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGGGACCTCAGGCTGCACGGGTACGGAGCTGGGTACGGAGGGTAGCGG
Internal bar code:CGATCTAGAAATGTGATGAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:630
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:GGACTACCGCGACCTGAAAA
Suggested primer 2:CAGCATACCGTTCACGCATG