Insertion junction: CLIP2.009239_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.009239
Chromosome:chromosome 10
Location:1576665
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g429000 UBC39 E2 ubiquitin conjugating enzyme; (1 of 1) IPR000104//IPR000608//IPR016135 - Antifreeze protein, type I // Ubiquitin-conjugating enzyme E2 // Ubiquitin-conjugating enzyme/RWD-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGATGAGCTGGGAATACCAGCGCTGCTGCAGCAGCTCGAGCCCAAGGA
Internal bar code:GCGTTACCGATAACATTCGCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2402
LEAP-Seq percent confirming:82.8283
LEAP-Seq n confirming:82
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:99

Suggested primers for confirmation by PCR

Suggested primer 1:CGGCATATCAACGTGCAAGG
Suggested primer 2:AACTCGGGGGAATGAGCAAG