| Common name: | UBC39 |
| Defline: | E2 ubiquitin conjugating enzyme; (1 of 1) IPR000104//IPR000608//IPR016135 - Antifreeze protein, type I // Ubiquitin-conjugating enzyme E2 // Ubiquitin-conjugating enzyme/RWD-like |
| Description: | |
| Synonyms: | g10598.t2 |
| Chromosome: | chromosome 10 |
We did not create a plasmid for this gene.
We did not determine any protein-protein interactions for this gene.
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.009239_1 | CLIP2.009239 | CDS | 80 | 6.1 |
| CLIP2.009239_2 | CLIP2.009239 | CDS | 80 | 6.1 |
| CLIP2.031863_1 | CLIP2.031863 | intron | 80 | 6.1 |
| CLIP2.031863_2 | CLIP2.031863 | intron | 80 | 6.1 |
| CLIP2.034137_1 | CLIP2.034137 | intron | 63 | 6.1 |
| CLIP2.036548_1 | CLIP2.036548 | intron | 80 | 6.1 |
| CLIP2.036548_2 | CLIP2.036548 | intron | 80 | 6.1 |
| CLIP2.036569_1 | CLIP2.036569 | CDS | 80 | 6.1 |
| CLIP2.036569_2 | CLIP2.036569 | CDS | 80 | 6.1 |
| CLIP2.036569_3 | CLIP2.036569 | CDS | 80 | 6.1 |
| CLIP2.038386_1 | CLIP2.038386 | intron | 80 | 6.1 |
| CLIP2.038386_2 | CLIP2.038386 | intron | 80 | 6.1 |
| LMJ.RY0402.046907_1 | LMJ.RY0402.046907 | 5'UTR_intron|intron | 95 | 5.5 |
| LMJ.RY0402.046907_2 | LMJ.RY0402.046907 | 5'UTR_intron|intron | 95 | 5.5 |
| LMJ.RY0402.181489_1 | LMJ.RY0402.181489 | 5'UTR|intron | 95 | 5.5 |
| LMJ.RY0402.181489_2 | LMJ.RY0402.181489 | 5'UTR|intron | 95 | 5.5 |
| LMJ.RY0402.197641_1 | LMJ.RY0402.197641 | 5'UTR|intron | 73 | 5.5 |
| PFAM: | PF00179 |
| PANTHER: | |
| KEGG_ec: | EC:6.3.2.19 |
| KEGG_orthology: | |
| KOG: | KOG0417 |
| Gene ontology terms:: | GO:0042309, GO:0050825, GO:0050826 |
| Best arabidopsis TAIR name: | AT2G16740.1, AT5G56150.1 |
| Best arabidopsis TAIR symbol: | UBC30, UBC29 |
| Best arabidopsis TAIR defline: | ubiquitin-conjugating enzyme 30, ubiquitin-conjugating enzyme 29 |
| Phytozome Locus Page |
Mutants in this gene exhibit a phenotype under the following conditions:
| Cisplatin, screen 1 of 4 ( 80% confidence (FDR = 0.2)) |
Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.
If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.