Insertion junction: CLIP2.031863_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.031863
Chromosome:chromosome 10
Location:1576550
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g429000 UBC39 E2 ubiquitin conjugating enzyme; (1 of 1) IPR000104//IPR000608//IPR016135 - Antifreeze protein, type I // Ubiquitin-conjugating enzyme E2 // Ubiquitin-conjugating enzyme/RWD-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTGTTGTATGCATTTCAACGTGATAGATTGATCTGCCTCGAAGTTACT
Internal bar code:CAATACTCGTTGACGTAGTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2907
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:CGGCATATCAACGTGCAAGG
Suggested primer 2:AACTCGGGGGAATGAGCAAG