Insertion junction: CLIP2.034137_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.034137
Chromosome:chromosome 10
Location:1575857
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre10.g429000 UBC39 E2 ubiquitin conjugating enzyme; (1 of 1) IPR000104//IPR000608//IPR016135 - Antifreeze protein, type I // Ubiquitin-conjugating enzyme E2 // Ubiquitin-conjugating enzyme/RWD-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCACGTTGATATGCCGTATGCATCGCATGCGACGTTTTGAGTGATGTGT
Internal bar code:GTGTTATATTGTGATCCGAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:852
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGGTCAATGGAGTCGTCC
Suggested primer 2:CCCATCGCACACCCTTTACT