Insertion junction: CLIP2.009247_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.009247
Chromosome:chromosome 17
Location:2953673
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g719500 AOF9 (1 of 2) 1.3.99.29 - Phytoene desaturase (zeta-carotene-forming) / 2-step phytoene desaturase; Flavin-containing amine oxidase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTCATCAATCGCCCGCGCTGCCTCGCGCACGACCGCATTGCGCGCAGC
Internal bar code:GATTCATGGCGATCCCGCGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:155
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CCGGTGTCTACAAGAACCCC
Suggested primer 2:AGAAGTACCGCTCGTGTGTG