Insertion junction: CLIP2.009388_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.009388
Chromosome:chromosome 10
Location:2632852
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre10.g437150 PPR6,CYCR5 PentatricoPeptide Repeat protein 6; (1 of 2) K17710 - pentatricopeptide repeat domain-containing protein 1 (PTCD1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGGAATAAGGCCTGGCCCTGGCCGCATCAATACAGGGAAGGCCGGCTA
Internal bar code:GTGTTATACAAGGCTGGTTTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:572
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:ATGAACCGGCGTGAATCCTT
Suggested primer 2:ACCGCATTACCAAGGACCTG