Insertion junction: CLIP2.009398_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.009398
Chromosome:chromosome 1
Location:5633521
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g040250 DNJ9 DnaJ-like protein; (1 of 2) PTHR15606//PTHR15606:SF3 - DNAJ HOMOLOG SUBFAMILY C MEMBER 8/LIPOPOLYSACCHARIDE SPECIFIC RESPONSE-7-RELATED // GPALPP MOTIFS-CONTAINING PROTEIN 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTGGGCCTCCGCGTGTCGATCCGCCTCGGTCGGGCCGCCCCTTGGGCC
Internal bar code:GGATAATGTATATTAGAACTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1628
LEAP-Seq percent confirming:71.0526
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:CCCATCCTCGTCGTCATCTG
Suggested primer 2:CGGCCGAAAGTCATCTGAGA