Insertion junction: CLIP2.009431_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.009431
Chromosome:chromosome 4
Location:2651289
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g223050 CAH2 (1 of 2) PTHR18952:SF104 - CARBONIC ANHYDRASE-RELATED PROTEIN; Carbonic anhydrase, alpha type%252C periplasmic intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCAAAACAACATCCTCGTTCCAACTCGCACTTGATCATTGCGAGACATG
Internal bar code:CGAACTCTTCGATGAATCGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:515
LEAP-Seq percent confirming:48.2759
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:AACGCTGGGCTTACTGTACC
Suggested primer 2:AAACCCTGATGCCTCCCATG