Gene: Cre04.g223050

Overview

Common name:CAH2
Defline:(1 of 2) PTHR18952:SF104 - CARBONIC ANHYDRASE-RELATED PROTEIN; Carbonic anhydrase, alpha type%252C periplasmic
Description:Carbonic anhydrase 2 (CA2), alpha type; periplasmic localization; high-CO2-inducible [PMID: 212472]; identical to CAH2_CHLRE, P24258 (gi:115455). The inorganic carbon-concentrating mechanism has been reviewed by Spalding (28) [PMID: 1759798].
Synonyms:CAH2,Cre04.g223050.t1.1,g4866.t1
Chromosome:chromosome 4

Protein Localization

The plasmid for this gene is not available.

Imaged strain: CSI_FC1A03

Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 48 hours.

Classification(s):

shapes in cytoplasm/a few medium puncta|vesicles in cytoplasm

secretory pathway/plasma membrane or cell wall

If you reference these protein localization data in a manuscript, please cite: Mackinder et al. 2017.

Venus                      Venus+Chlorophyll

Protein-Protein Interactions

Bait ID Bait Name Prey ID Prey Name Reference
Cre04.g223050 CAH2 Cre01.g016556 Mackinder et al. 2017
Cre04.g223050 CAH2 Cre01.g017900 Mackinder et al. 2017
Cre04.g223050 CAH2 Cre01.g022600 CGL13 Mackinder et al. 2017
Cre04.g223050 CAH2 Cre01.g038400 CRT2 Mackinder et al. 2017
Cre04.g223050 CAH2 Cre02.g093750 NRX2 Mackinder et al. 2017
Cre04.g223050 CAH2 Cre02.g104350 PDI5 Mackinder et al. 2017
Cre04.g223050 CAH2 Cre03.g144564 MMP13 Mackinder et al. 2017
Cre04.g223050 CAH2 Cre03.g190500 RSW3,GLH1,GLC2A Mackinder et al. 2017
Cre04.g223050 CAH2 Cre04.g217921 COPB1 Mackinder et al. 2017
Cre04.g223050 CAH2 Cre04.g217922 Mackinder et al. 2017
Cre04.g223050 CAH2 Cre04.g223050 CAH2 Mackinder et al. 2017
Cre04.g223050 CAH2 Cre04.g223100 CAH1 Mackinder et al. 2017
Cre04.g223050 CAH2 Cre05.g233303 Mackinder et al. 2017
Cre04.g223050 CAH2 Cre05.g245350 Mackinder et al. 2017
Cre04.g223050 CAH2 Cre06.g257900 Mackinder et al. 2017
Cre04.g223050 CAH2 Cre06.g275900 HON2,HON3 Mackinder et al. 2017
Cre04.g223050 CAH2 Cre06.g278165 Mackinder et al. 2017
Cre04.g223050 CAH2 Cre06.g278170 FAP237,FAS7,FAS16,FLA11 Mackinder et al. 2017
Cre04.g223050 CAH2 Cre06.g310750 COPG1 Mackinder et al. 2017
Cre04.g223050 CAH2 Cre07.g321400 MAW6,FAP113 Mackinder et al. 2017
Cre04.g223050 CAH2 Cre07.g330750 PHC43 Mackinder et al. 2017
Cre04.g223050 CAH2 Cre09.g393700 MMP3 Mackinder et al. 2017
Cre04.g223050 CAH2 Cre10.g452250 FAP41 Mackinder et al. 2017
Cre04.g223050 CAH2 Cre11.g468359 Mackinder et al. 2017
Cre04.g223050 CAH2 Cre12.g504300 Mackinder et al. 2017
Cre04.g223050 CAH2 Cre12.g523300 RPN1A,OST1A,GTR22 Mackinder et al. 2017
Cre04.g223050 CAH2 Cre13.g565850 COPA1 Mackinder et al. 2017
Cre04.g223050 CAH2 Cre13.g567450 HON1 Mackinder et al. 2017
Cre04.g223050 CAH2 Cre14.g619166 CSK6 Mackinder et al. 2017
Cre04.g223050 CAH2 Cre14.g621100 Mackinder et al. 2017
Cre04.g223050 CAH2 Cre16.g650600 MST1 Mackinder et al. 2017
Cre04.g223050 CAH2 Cre16.g665600 CSK7 Mackinder et al. 2017
Cre04.g223050 CAH2 Cre17.g705500 PHC23 Mackinder et al. 2017
Cre04.g223050 CAH2 Cre17.g718500 MMP2,MMP1,GLE1 Mackinder et al. 2017

Mutant Strains

Insertion Junction Mutant Strain Insertion Junction Feature Confidence (%) Genome Version
CLIP2.009431_1 CLIP2.009431 intron 80 6.1
CLIP2.009431_2 CLIP2.009431 intron 80 6.1
CLIP2.011308_1 CLIP2.011308 intron 80 6.1
CLIP2.027207_1 CLIP2.027207 intron 80 6.1
CLIP2.055200_1 CLIP2.055200 CDS 80 6.1
CLIP2.058430_1 CLIP2.058430 3'UTR 80 6.1
CLIP2.058430_2 CLIP2.058430 3'UTR 80 6.1
CLIP2.062125_1 CLIP2.062125 5'UTR 80 6.1
CLIP2.065240_1 CLIP2.065240 3'UTR 80 6.1
CLIP2.065240_2 CLIP2.065240 3'UTR 80 6.1
CLIP2.067357_1 CLIP2.067357 3'UTR 40 6.1
CLIP2.070788_1 CLIP2.070788 3'UTR 80 6.1
CLIP2.070788_2 CLIP2.070788 3'UTR 80 6.1
LMJ.RY0402.044927_1 LMJ.RY0402.044927 3'UTR 58 5.5
LMJ.RY0402.066751_1 LMJ.RY0402.066751 5'UTR 73 5.5
LMJ.RY0402.164815_2 LMJ.RY0402.164815 3'UTR 95 5.5
LMJ.RY0402.164815_3 LMJ.RY0402.164815 3'UTR 95 5.5
LMJ.RY0402.173201_1 LMJ.RY0402.173201 3'UTR 95 5.5
LMJ.RY0402.173201_2 LMJ.RY0402.173201 3'UTR 95 5.5
LMJ.RY0402.195677_1 LMJ.RY0402.195677 CDS 73 5.5
LMJ.RY0402.214290_2 LMJ.RY0402.214290 CDS 73 5.5
LMJ.RY0402.229992_1 LMJ.RY0402.229992 intron 95 5.5
LMJ.RY0402.229992_2 LMJ.RY0402.229992 intron 95 5.5
LMJ.RY0402.235453_1 LMJ.RY0402.235453 intron 95 5.5
LMJ.RY0402.235453_2 LMJ.RY0402.235453 intron 95 5.5
LMJ.RY0402.244638_2 LMJ.RY0402.244638 3'UTR 73 5.5
LMJ.RY0402.252266_1 LMJ.RY0402.252266 CDS 73 5.5
LMJ.RY0402.254362_1 LMJ.RY0402.254362 intron 73 5.5

Gene Annotations

PFAM:PF00194
PANTHER: PTHR18952 PTHR18952:SF104
KEGG_ec:EC:4.2.1.1
KEGG_orthology:K01672
KOG:KOG0382
Gene ontology terms::
Best arabidopsis TAIR name:AT4G20990.1
Best arabidopsis TAIR symbol:ACA4,ATACA4
Best arabidopsis TAIR defline:alpha carbonic anhydrase 4
Phytozome Locus Page

Phenotypes

Our phenotype screens did not find statistically significant results for this gene.