Insertion junction: CLIP2.070788_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.070788
Chromosome:chromosome 4
Location:2647618
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g223050 CAH2 (1 of 2) PTHR18952:SF104 - CARBONIC ANHYDRASE-RELATED PROTEIN; Carbonic anhydrase, alpha type%252C periplasmic 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTGATCAGGGCATCAAGTTTCGTGCCCCGCACCGCCACATCACGCAAT
Internal bar code:CAATGGCAAATGAGCGTTTCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2234
LEAP-Seq percent confirming:92.1875
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCCCTTGCCGTGTCTCAT
Suggested primer 2:AGAACCCCGATGCTTGTGAG