Insertion junction: CLIP2.011308_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.011308
Chromosome:chromosome 4
Location:2648554
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g223050 CAH2 (1 of 2) PTHR18952:SF104 - CARBONIC ANHYDRASE-RELATED PROTEIN; Carbonic anhydrase, alpha type%252C periplasmic intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTCCATCTCATCATTGCTACAGACCGATGCTGCCCACGCGGACGCCGGC
Internal bar code:CGTTTTAGAAACGGAAAGTGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1772
LEAP-Seq percent confirming:91.3043
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CAACCCCACCTTGATCCTCC
Suggested primer 2:CACGTGCATGCCTTATGAGC