Insertion junction: CLIP2.009450_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.009450
Chromosome:chromosome 2
Location:3959238
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g102450 (1 of 1) PTHR22847//PTHR22847:SF358 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTGCCTCCTGCGCCCTGCGCCCTGCGCCCCACGCCCTGCCGGCTCCCA
Internal bar code:AGATAATTCACGGAGCCGGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2768
LEAP-Seq percent confirming:91.3043
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:TAAGCGCCTCGAGTATGCAG
Suggested primer 2:TGGAACATTGACGTGCGGTA