Gene: Cre02.g102450
Overview
| Common name: | |
| Defline: | (1 of 1) PTHR22847//PTHR22847:SF358 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED |
| Description: | |
| Synonyms: | g2092.t1,Cre02.g102450.t1.1 |
| Chromosome: | chromosome 2 |
Protein Localization
A plasmid for expressing Cre02.g102450 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre02.g102450-Venus-3xFLAG
Imaged strain: CSI_LW12C5
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
shapes in cytoplasm/uncategorized shapes in cytoplasm
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.009450_1 | CLIP2.009450 | intron | 80 | 6.1 |
| CLIP2.022406_1 | CLIP2.022406 | CDS | 80 | 6.1 |
| CLIP2.022406_2 | CLIP2.022406 | CDS | 80 | 6.1 |
| CLIP2.030182_1 | CLIP2.030182 | CDS | 80 | 6.1 |
| CLIP2.030182_2 | CLIP2.030182 | CDS | 80 | 6.1 |
| CLIP2.064546_1 | CLIP2.064546 | 3'UTR | 80 | 6.1 |
| CLIP2.064546_2 | CLIP2.064546 | 3'UTR | 80 | 6.1 |
| CLIP2.066145_1 | CLIP2.066145 | 3'UTR | 80 | 6.1 |
| CLIP2.066145_2 | CLIP2.066145 | 3'UTR | 80 | 6.1 |
| CLIP2.066551_1 | CLIP2.066551 | 5'UTR | 80 | 6.1 |
| CLIP2.066551_2 | CLIP2.066551 | 5'UTR | 80 | 6.1 |
| LMJ.RY0402.041042_1 | LMJ.RY0402.041042 | intron | 95 | 5.5 |
| LMJ.RY0402.041042_2 | LMJ.RY0402.041042 | CDS | 95 | 5.5 |
| LMJ.RY0402.078315_1 | LMJ.RY0402.078315 | intron | 73 | 5.5 |
| LMJ.RY0402.087152_1 | LMJ.RY0402.087152 | intron | 73 | 5.5 |
| LMJ.RY0402.153894_1 | LMJ.RY0402.153894 | CDS | 73 | 5.5 |
| LMJ.RY0402.154555_1 | LMJ.RY0402.154555 | CDS | 73 | 5.5 |
| LMJ.RY0402.167332_1 | LMJ.RY0402.167332 | CDS | 73 | 5.5 |
| LMJ.RY0402.188875_1 | LMJ.RY0402.188875 | intron | 73 | 5.5 |
Gene Annotations
| PFAM: | PF00400 |
| PANTHER: | PTHR22847 PTHR22847:SF358 |
| KEGG_ec: | |
| KEGG_orthology: | |
| KOG: | KOG2096 |
| Gene ontology terms:: | GO:0005515 |
| Best arabidopsis TAIR name: | AT4G00090 |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | Transducin/WD40 repeat-like superfamily protein |
| Phytozome Locus Page |
Phenotypes
Mutants in this gene exhibit a phenotype under the following conditions:
| Zeocin, screen 4 of 5 ( 83% confidence (FDR = 0.17)) |
Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.
If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.