Insertion junction: CLIP2.022406_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.022406
Chromosome:chromosome 2
Location:3955813
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g102450 (1 of 1) PTHR22847//PTHR22847:SF358 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGGATCTGAAGTCACTTATCAAGGCGGAAAAGACCGCAGCCAAGAAGA
Internal bar code:GGTTTTTGCGGGGCGTCAATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3507
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGCTCCCACATACCGTAC
Suggested primer 2:CATTGGTCCCCAGCCTTCAT