Insertion junction: CLIP2.066551_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.066551
Chromosome:chromosome 2
Location:3955163
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g102450 (1 of 1) PTHR22847//PTHR22847:SF358 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAAGATAAATCCTACCCAGTTGGCTCTTGCTTAAGGAAGAGACAGGAAAC
Internal bar code:TATAGCCGTGGTTCTATAGTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1353
LEAP-Seq percent confirming:54.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGTGCGTCACAACAGGTA
Suggested primer 2:TCCGGGACAGCAGACTTTTC