Insertion junction: CLIP2.064546_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.064546
Chromosome:chromosome 2
Location:3959960
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g102450 (1 of 1) PTHR22847//PTHR22847:SF358 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCCCCGGGACCCCCCTTGAGGGGACGACCGACCCCCACACGGACAAAA
Internal bar code:AATATTTCTTGTGCTAACAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:4812
LEAP-Seq percent confirming:98.5294
LEAP-Seq n confirming:67
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:68

Suggested primers for confirmation by PCR

Suggested primer 1:CGCATTGCAAGTATCCTGGC
Suggested primer 2:TTGCAAAGCGAGAGGGACAT