Insertion junction: CLIP2.066551_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.066551
Chromosome:chromosome 2
Location:3955148
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g102450 (1 of 1) PTHR22847//PTHR22847:SF358 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCTGCTGTAGAATGGGTATGGCAAGTGACGTGTGCAAGAGTTCTGCAGA
Internal bar code:GCGCTAGGAAGTCAGCGTGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2197
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TCCGGGACAGCAGACTTTTC
Suggested primer 2:GAGGTGCGTCACAACAGGTA