Insertion junction: CLIP2.009466_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.009466
Chromosome:chromosome 3
Location:6501457
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g193800 TSN1 Aspartyl-tRNA synthetase; (1 of 1) 6.1.1.22 - Asparagine--tRNA ligase / Asparaginyl-tRNA synthetase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTATCTTGGTGGCTGTTCCACAGGTGACCACGCTGCTGGGCAAGATGA
Internal bar code:ATTGGGCCCTGGGTTTATCGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1430
LEAP-Seq percent confirming:73.8095
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:CACTGCTGCATAATTCCCGC
Suggested primer 2:TGAGCTGAAGGCAGTCTGTG