Insertion junction: CLIP2.009603_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.009603
Chromosome:chromosome 16
Location:1227265
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g650900 (1 of 1) IPR000104//IPR001965//IPR011011//IPR017956 - Antifreeze protein, type I // Zinc finger, PHD-type // Zinc finger, FYVE/PHD-type // AT hook, DNA-binding motif intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTTTTTACCGGCGGTGTGGCAAGCTGGCAACGCTGGTCCCCGCGGGCAG
Internal bar code:GCCTGAATTAGCCTGAGGACGA

Confirmation - LEAP-Seq

LEAP-Seq distance:843
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TGTAGAATCCCCTGCCTCCA
Suggested primer 2:TTGATAGCGATACCCGTGGC