Insertion junction: CLIP2.009603_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.009603
Chromosome:chromosome 16
Location:1227265
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g650900 (1 of 1) IPR000104//IPR001965//IPR011011//IPR017956 - Antifreeze protein, type I // Zinc finger, PHD-type // Zinc finger, FYVE/PHD-type // AT hook, DNA-binding motif intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAGGCTTACGCGGCTTTCCACATAGAGCGACACGCTGCCGGCATACTG
Internal bar code:GCCTGAATTAGCCTGAGGACGA

Confirmation - LEAP-Seq

LEAP-Seq distance:606
LEAP-Seq percent confirming:45.4545
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:TTGATAGCGATACCCGTGGC
Suggested primer 2:TGTAGAATCCCCTGCCTCCA