Insertion junction: CLIP2.009655_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.009655
Chromosome:chromosome 2
Location:4776538
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g108750 (1 of 6) PTHR23257//PTHR23257:SF529 - SERINE-THREONINE PROTEIN KINASE // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTCCGCCCTTGACGCCGCTGGCGAGCGCTGACGGGGGCGTGCTTGGGCC
Internal bar code:TAAGAGAGGGGAGTGTCTATAC

Confirmation - LEAP-Seq

LEAP-Seq distance:688
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCTCTTGCGTGTCACAGA
Suggested primer 2:CGCTTTGCCTTGCTGTTTCT