Insertion junction: CLIP2.010170_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.010170
Chromosome:chromosome 3
Location:5132799
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g180800 HDA16 Histone deacetylase complex protein; (1 of 1) K11644 - paired amphipathic helix protein Sin3a (SIN3A) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGAATTCGCCCACCTTGCTGGTGGTGCAGCTGATCTTGCACTCCAGGC
Internal bar code:TCAATTGTGCCCTCGTTCGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3349
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CACCACCTTGTACCACGTCA
Suggested primer 2:GTCACAACAACACGCAGGTC