Gene: Cre03.g180800

Overview

Common name:HDA16
Defline:Histone deacetylase complex protein; (1 of 1) K11644 - paired amphipathic helix protein Sin3a (SIN3A)
Description:Histone deacetylase complex, SIN3 component, ChromDB SNT3401
Synonyms:g3747.t1,HDA16
Chromosome:chromosome 3

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

Bait ID Bait Name Prey ID Prey Name Reference
Cre16.g672300 Cre03.g180800 HDA16 Wang et al. 2023

Mutant Strains

Insertion Junction Mutant Strain Insertion Junction Feature Confidence (%) Genome Version
CLIP2.010170_1 CLIP2.010170 intron 80 6.1
CLIP2.010170_2 CLIP2.010170 intron 80 6.1
CLIP2.033801_1 CLIP2.033801 CDS 80 6.1
CLIP2.033801_2 CLIP2.033801 CDS 80 6.1
CLIP2.072005_1 CLIP2.072005 5'UTR 80 6.1
CLIP2.072005_2 CLIP2.072005 5'UTR 80 6.1
LMJ.RY0402.074122_1 LMJ.RY0402.074122 intron 95 5.5
LMJ.RY0402.074122_2 LMJ.RY0402.074122 intron 95 5.5
LMJ.RY0402.090820_1 LMJ.RY0402.090820 intron 73 5.5
LMJ.RY0402.119769_1 LMJ.RY0402.119769 3'UTR 58 5.5
LMJ.RY0402.149602_1 LMJ.RY0402.149602 3'UTR 95 5.5
LMJ.RY0402.149602_2 LMJ.RY0402.149602 3'UTR 95 5.5
LMJ.RY0402.239881_1 LMJ.RY0402.239881 3'UTR 73 5.5

Gene Annotations

PFAM:PF02671, PF08295, PF16879
PANTHER: PTHR12346
KEGG_ec:
KEGG_orthology:K11644
KOG:KOG4204
Gene ontology terms::GO:0006355
Best arabidopsis TAIR name:AT1G70060
Best arabidopsis TAIR symbol:SNL4
Best arabidopsis TAIR defline:SIN3-like 4
Phytozome Locus Page

Phenotypes

Our phenotype screens did not find statistically significant results for this gene.