Insertion junction: CLIP2.033801_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.033801
Chromosome:chromosome 3
Location:5133301
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g180800 HDA16 Histone deacetylase complex protein; (1 of 1) K11644 - paired amphipathic helix protein Sin3a (SIN3A) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACCTACAAGGCACCAGGGATGGGGTTGGTAGGACAGTCCCGTTAGTGAG
Internal bar code:AGCTTATGCGTCCCGGACTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2856
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTCCTTGGCGATTGCAGA
Suggested primer 2:TGTCCAGCACGTAAGACACC