Insertion junction: CLIP2.010220_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.010220
Chromosome:chromosome 10
Location:2634013
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g437150 PPR6,CYCR5 PentatricoPeptide Repeat protein 6; (1 of 2) K17710 - pentatricopeptide repeat domain-containing protein 1 (PTCD1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCCTTCAACGACTTCGTGCACATCCAGCAGAGCCAGCAGCTCAAGCGC
Internal bar code:ATATGGGCCGCCGTGCTACATA

Confirmation - LEAP-Seq

LEAP-Seq distance:3894
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTCGTTCAACCAGCACCC
Suggested primer 2:CTGAGGAGAGAAGGGAGGCT