Insertion junction: CLIP2.010307_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.010307
Chromosome:chromosome 16
Location:1273098
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g651350 ATG17 AuTophaGy related; (1 of 1) PTHR13222//PTHR13222:SF1 - CGTHBA PROTEIN -14 GENE PROTEIN // RB1-INDUCIBLE COILED-COIL PROTEIN 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACACACGCTCACCGGCGCCGTCTTTTTTACCCCACTGCCTCCAGGTGCT
Internal bar code:GTCAAGGCCCTATAATGAAACT

Confirmation - LEAP-Seq

LEAP-Seq distance:2445
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTGAGTAGCGGATCTGGT
Suggested primer 2:ATGAACGTATTTGCCCCCGT