Gene: Cre16.g651350

Overview

Common name:	ATG17
Defline:	AuTophaGy related; (1 of 1) PTHR13222//PTHR13222:SF1 - CGTHBA PROTEIN -14 GENE PROTEIN // RB1-INDUCIBLE COILED-COIL PROTEIN 1
Description:	Scaffold protein responsible for phagophore assembly site organization; regulatory subunit of an autophagy-specific complex that includes Atg1p and Atg13p; stimulates Atg1p kinase activity; human ortholog RB1CC1/FIP200 interacts with p53, which inhibits autophagy in human cells
Synonyms:	g15756.t1
Chromosome:	chromosome 16

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction	Mutant Strain	Insertion Junction Feature	Confidence (%)	Genome Version
CLIP2.008832_1	CLIP2.008832	intron	80	6.1
CLIP2.008832_2	CLIP2.008832	intron	80	6.1
CLIP2.010307_1	CLIP2.010307	intron	80	6.1
CLIP2.010307_2	CLIP2.010307	intron	80	6.1
CLIP2.010753_2	CLIP2.010753	intron	40	6.1
CLIP2.013781_3	CLIP2.013781	5'UTR	80	6.1
CLIP2.013781_4	CLIP2.013781	5'UTR	80	6.1
CLIP2.014019_1	CLIP2.014019	intron	80	6.1
CLIP2.014019_2	CLIP2.014019	intron	80	6.1
CLIP2.016613_3	CLIP2.016613	CDS	80	6.1
CLIP2.016613_4	CLIP2.016613	CDS	80	6.1
CLIP2.019954_1	CLIP2.019954	intron	80	6.1
CLIP2.019954_2	CLIP2.019954	intron	80	6.1
CLIP2.045820_1	CLIP2.045820	intron	80	6.1
CLIP2.045820_2	CLIP2.045820	intron	80	6.1
CLIP2.049561_3	CLIP2.049561	5'UTR	80	6.1
CLIP2.050164_3	CLIP2.050164	5'UTR	80	6.1
CLIP2.050164_4	CLIP2.050164	5'UTR	80	6.1
CLIP2.058884_2	CLIP2.058884	5'UTR	63	6.1
CLIP2.065279_2	CLIP2.065279	CDS	80	6.1
LMJ.RY0402.060191_2	LMJ.RY0402.060191	5'UTR	58	5.5
LMJ.RY0402.061601_1	LMJ.RY0402.061601	intron	73	5.5
LMJ.RY0402.072204_1	LMJ.RY0402.072204	3'UTR	95	5.5
LMJ.RY0402.072204_2	LMJ.RY0402.072204	3'UTR	95	5.5
LMJ.RY0402.075529_2	LMJ.RY0402.075529	intron	58	5.5
LMJ.RY0402.092335_1	LMJ.RY0402.092335	3'UTR	95	5.5
LMJ.RY0402.092335_2	LMJ.RY0402.092335	3'UTR	95	5.5
LMJ.RY0402.094248_3	LMJ.RY0402.094248	intron	58	5.5
LMJ.RY0402.098431_2	LMJ.RY0402.098431	5'UTR	73	5.5
LMJ.RY0402.105253_1	LMJ.RY0402.105253	3'UTR	95	5.5
LMJ.RY0402.105253_2	LMJ.RY0402.105253	3'UTR	95	5.5
LMJ.RY0402.113374_1	LMJ.RY0402.113374	3'UTR	95	5.5
LMJ.RY0402.113374_2	LMJ.RY0402.113374	3'UTR	95	5.5
LMJ.RY0402.116162_2	LMJ.RY0402.116162	3'UTR	95	5.5
LMJ.RY0402.126406_1	LMJ.RY0402.126406	5'UTR	95	5.5
LMJ.RY0402.126406_2	LMJ.RY0402.126406	5'UTR	95	5.5
LMJ.RY0402.133577_2	LMJ.RY0402.133577	3'UTR	73	5.5
LMJ.RY0402.154636_1	LMJ.RY0402.154636	intron	95	5.5
LMJ.RY0402.154636_2	LMJ.RY0402.154636	5'UTR	95	5.5
LMJ.RY0402.158114_1	LMJ.RY0402.158114	3'UTR	95	5.5
LMJ.RY0402.158114_2	LMJ.RY0402.158114	3'UTR	95	5.5
LMJ.RY0402.227420_1	LMJ.RY0402.227420	intron	95	5.5
LMJ.RY0402.227420_2	LMJ.RY0402.227420	intron	95	5.5
LMJ.RY0402.237342_2	LMJ.RY0402.237342	5'UTR	95	5.5
LMJ.RY0402.237342_3	LMJ.RY0402.237342	5'UTR	95	5.5
LMJ.RY0402.244694_1	LMJ.RY0402.244694	CDS	58	5.5
LMJ.RY0402.246235_1	LMJ.RY0402.246235	3'UTR	95	5.5
LMJ.RY0402.246235_2	LMJ.RY0402.246235	3'UTR	95	5.5
LMJ.RY0402.255121_1	LMJ.RY0402.255121	intron	73	5.5

Gene Annotations

PFAM:	PF04108
PANTHER:	PTHR13222 PTHR13222:SF1
KEGG_ec:
KEGG_orthology:
KOG:
Gene ontology terms::	GO:0005515, GO:0006914, GO:0042309, GO:0050825, GO:0050826
Best arabidopsis TAIR name:	AT4G30790.1
Best arabidopsis TAIR symbol:
Best arabidopsis TAIR defline:
Phytozome Locus Page

Phenotypes

Our phenotype screens did not find statistically significant results for this gene.