Insertion junction: CLIP2.049561_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.049561
Chromosome:chromosome 16
Location:1276221
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g651350 ATG17 AuTophaGy related; (1 of 1) PTHR13222//PTHR13222:SF1 - CGTHBA PROTEIN -14 GENE PROTEIN // RB1-INDUCIBLE COILED-COIL PROTEIN 1 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAGCTTAAAGTTAGCGCTTAAAGTTAGCGCTTAAAGTTTCCTGACAATA
Internal bar code:CGGTTGTTAGCGAATTACGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3519
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:73
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:73

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGGGGAGTGACCACGATT
Suggested primer 2:CACCTTCGGGAGTCCATACG