Insertion junction: LMJ.RY0402.237342_3

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.237342
Chromosome:chromosome 16
Location:1273460
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre16.g651350 ATG17 AuTophaGy related; (1 of 1) PTHR13222//PTHR13222:SF1 - CGTHBA PROTEIN -14 GENE PROTEIN // RB1-INDUCIBLE COILED-COIL PROTEIN 1 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCTTAAAGTTAGCGCTTAAAGTTAGCGCT
Internal bar code:CCGTCTGCTCACGGTGATGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:606
LEAP-Seq percent confirming:98.2759
LEAP-Seq n confirming:228
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:ACGATTACTCGCCCTCATTG
Suggested primer 2:TGGATCCAAAGGCTAGGATG