Insertion junction: CLIP2.058884_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.058884
Chromosome:chromosome 16
Location:1276186
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre16.g651350 ATG17 AuTophaGy related; (1 of 1) PTHR13222//PTHR13222:SF1 - CGTHBA PROTEIN -14 GENE PROTEIN // RB1-INDUCIBLE COILED-COIL PROTEIN 1 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGCCAGGACGAAGCCCCAAGTCTTTGAAAGTTAGTAGCTTAAAGTTAG
Internal bar code:GGTGCCGCTTAAGCTTGTTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3132
LEAP-Seq percent confirming:30.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGGGGAGTGACCACGATT
Suggested primer 2:CACCTTCGGGAGTCCATACG