Insertion junction: CLIP2.050164_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.050164
Chromosome:chromosome 16
Location:1276287
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g651350 ATG17 AuTophaGy related; (1 of 1) PTHR13222//PTHR13222:SF1 - CGTHBA PROTEIN -14 GENE PROTEIN // RB1-INDUCIBLE COILED-COIL PROTEIN 1 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGATGCAGCTTACATATTGTCAGGAAACTTTAAGCGCTAACTTTAAGC
Internal bar code:TAACGGGTTCCGGTTGGGCCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1054
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CACCTTCGGGAGTCCATACG
Suggested primer 2:GTTGGGGAGTGACCACGATT