Insertion junction: CLIP2.016613_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.016613
Chromosome:chromosome 16
Location:1275711
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g651350 ATG17 AuTophaGy related; (1 of 1) PTHR13222//PTHR13222:SF1 - CGTHBA PROTEIN -14 GENE PROTEIN // RB1-INDUCIBLE COILED-COIL PROTEIN 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGATAGCGATGTACCAGGGAGCTCGGCTTGACCCAAACAAGCCGCTGG
Internal bar code:CTGTTGTCCTTCTGTATTCCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:561
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TCTTTGCAGACGTCTCGCTT
Suggested primer 2:GTTGGGGAGTGACCACGATT