Insertion junction: LMJ.RY0402.092335_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.092335
Chromosome:chromosome 16
Location:1265845
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre16.g651350 ATG17 AuTophaGy related; (1 of 1) PTHR13222//PTHR13222:SF1 - CGTHBA PROTEIN -14 GENE PROTEIN // RB1-INDUCIBLE COILED-COIL PROTEIN 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAATGGCTCAGAGCGAAGAATGAGCGGTG
Internal bar code:GCGTCCCCTGAATGTTCTGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:663
LEAP-Seq percent confirming:99.7345
LEAP-Seq n confirming:6387
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GTATGGTACACCCCGCAATC
Suggested primer 2:AGGAGTCAGACGACGCAGAG