Insertion junction: CLIP2.065279_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.065279
Chromosome:chromosome 16
Location:1275698
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g651350 ATG17 AuTophaGy related; (1 of 1) PTHR13222//PTHR13222:SF1 - CGTHBA PROTEIN -14 GENE PROTEIN // RB1-INDUCIBLE COILED-COIL PROTEIN 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCGCTATCTGGTCCGCTACGGGAACCCCGGTGAACGAGACCAGCGCGT
Internal bar code:TATAATATTAATCACGGGTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2347
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:62
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:ATGAACGTATTTGCCCCCGT
Suggested primer 2:TCTTTGCAGACGTCTCGCTT