Insertion junction: CLIP2.013781_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.013781
Chromosome:chromosome 16
Location:1276141
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g651350 ATG17 AuTophaGy related; (1 of 1) PTHR13222//PTHR13222:SF1 - CGTHBA PROTEIN -14 GENE PROTEIN // RB1-INDUCIBLE COILED-COIL PROTEIN 1 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGCTCGGCTCCAAAGCCAAACTCTAGCTGCTGTGGGCCCTGACGGGCC
Internal bar code:ATCTCAGTTTTGAACAATTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:918
LEAP-Seq percent confirming:97.1429
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CACCTTCGGGAGTCCATACG
Suggested primer 2:GTTGGGGAGTGACCACGATT