Insertion junction: CLIP2.019954_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.019954
Chromosome:chromosome 16
Location:1272612
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g651350 ATG17 AuTophaGy related; (1 of 1) PTHR13222//PTHR13222:SF1 - CGTHBA PROTEIN -14 GENE PROTEIN // RB1-INDUCIBLE COILED-COIL PROTEIN 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGACAAACCACGCGCCGGGATCAGGCCACACACACGCAAACGCGCACAC
Internal bar code:GTTTCATTGATTCTCATCATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1116
LEAP-Seq percent confirming:95.2381
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CACGCGTTATCGGACGAAAC
Suggested primer 2:CAACAGCTGAAACGGTTGCA