Insertion junction: LMJ.RY0402.126406_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.126406
Chromosome:chromosome 16
Location:1273506
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre16.g651350 ATG17 AuTophaGy related; (1 of 1) PTHR13222//PTHR13222:SF1 - CGTHBA PROTEIN -14 GENE PROTEIN // RB1-INDUCIBLE COILED-COIL PROTEIN 1 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTCAGGAAACTTTAAGCGCTAACTTTAA
Internal bar code:CAGGGGTGATCTGCGCGGAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:415
LEAP-Seq percent confirming:96.1538
LEAP-Seq n confirming:900
LEAP-Seq n nonconfirming:36
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:ACGATTACTCGCCCTCATTG
Suggested primer 2:TGGATCCAAAGGCTAGGATG