Insertion junction: CLIP2.010592_4

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.010592
Chromosome:chromosome 12
Location:1202779
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g490300 MSD4 (1 of 5) K04564 - superoxide dismutase, Fe-Mn family (SOD2); Mn superoxide dismutase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTGGGGAGGCTGAACTGCATTGGCCAGGGGAATGTGTTGCTGGCGTCC
Internal bar code:TCGTTGATCTAATAGTATAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1710
LEAP-Seq percent confirming:88.5714
LEAP-Seq n confirming:62
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:ATTTGGTCCAGCGTACGTGT
Suggested primer 2:CCTACACCCACGTACACACC