| Common name: | MSD4 |
| Defline: | (1 of 5) K04564 - superoxide dismutase, Fe-Mn family (SOD2); Mn superoxide dismutase |
| Description: | Expression is up-regulated severalfold in Mn-deficient cells |
| Synonyms: | g12179.t1,Cre12.g490300.t1.1 |
| Chromosome: | chromosome 12 |
We did not create a plasmid for this gene.
We did not determine any protein-protein interactions for this gene.
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.010592_3 | CLIP2.010592 | intron | 80 | 6.1 |
| CLIP2.010592_4 | CLIP2.010592 | intron | 80 | 6.1 |
| CLIP2.012262_1 | CLIP2.012262 | intron | 80 | 6.1 |
| CLIP2.012262_2 | CLIP2.012262 | intron | 80 | 6.1 |
| CLIP2.021546_1 | CLIP2.021546 | intron | 80 | 6.1 |
| CLIP2.021546_2 | CLIP2.021546 | intron | 80 | 6.1 |
| CLIP2.040382_1 | CLIP2.040382 | intron | 80 | 6.1 |
| CLIP2.040382_2 | CLIP2.040382 | intron | 80 | 6.1 |
| CLIP2.050678_2 | CLIP2.050678 | intron | 80 | 6.1 |
| CLIP2.050678_3 | CLIP2.050678 | intron | 80 | 6.1 |
| CLIP2.065297_1 | CLIP2.065297 | CDS | 80 | 6.1 |
| LMJ.RY0402.087057_3 | LMJ.RY0402.087057 | CDS | 73 | 5.5 |
| LMJ.RY0402.093857_1 | LMJ.RY0402.093857 | intron | 73 | 5.5 |
| LMJ.RY0402.119611_1 | LMJ.RY0402.119611 | intron | 73 | 5.5 |
| LMJ.RY0402.142788_2 | LMJ.RY0402.142788 | intron | 58 | 5.5 |
| PFAM: | PF00081, PF02777 |
| PANTHER: | PTHR11404 |
| KEGG_ec: | EC:1.15.1.1 |
| KEGG_orthology: | K04564 |
| KOG: | KOG0876 |
| Gene ontology terms:: | GO:0004784, GO:0006801, GO:0046872, GO:0055114 |
| Best arabidopsis TAIR name: | AT3G10920.1 |
| Best arabidopsis TAIR symbol: | ATMSD1,MEE33,MSD1 |
| Best arabidopsis TAIR defline: | manganese superoxide dismutase 1 |
| Phytozome Locus Page |
Mutants in this gene exhibit a phenotype under the following conditions:
| UV radiation, screen 1 of 2 ( 77% confidence (FDR = 0.23)) |
Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.
If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.