Insertion junction: CLIP2.050678_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.050678
Chromosome:chromosome 12
Location:1202889
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g490300 MSD4 (1 of 5) K04564 - superoxide dismutase, Fe-Mn family (SOD2); Mn superoxide dismutase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTT
Internal bar code:CTGTAATTTGCGCGTAACCCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:412
LEAP-Seq percent confirming:28.5714
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CACACACATACAGGCCCCTT
Suggested primer 2:ATTTGGTCCAGCGTACGTGT