Insertion junction: CLIP2.040382_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.040382
Chromosome:chromosome 12
Location:1202772
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g490300 MSD4 (1 of 5) K04564 - superoxide dismutase, Fe-Mn family (SOD2); Mn superoxide dismutase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGGACTCGGCCGCTCGGACCACAGGGACCCCGCCGTGCCACCTACCTC
Internal bar code:TTACCACTGTTACTACAAAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:321
LEAP-Seq percent confirming:42.3077
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CCTACACCCACGTACACACC
Suggested primer 2:ATTTGGTCCAGCGTACGTGT