Insertion junction: CLIP2.040382_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.040382
Chromosome:chromosome 12
Location:1202778
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g490300 MSD4 (1 of 5) K04564 - superoxide dismutase, Fe-Mn family (SOD2); Mn superoxide dismutase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGTGGGGAGGCTGAACTGCATTGGCCAGGGGAATGTGTTGCTGGCGTC
Internal bar code:TTACCACTGTTACTACAAAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1553
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:ATTTGGTCCAGCGTACGTGT
Suggested primer 2:CCTACACCCACGTACACACC