Insertion junction: CLIP2.010649_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.010649
Chromosome:chromosome 7
Location:5256926
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g349500 (1 of 2) PTHR15574:SF40 - WD AND TETRATRICOPEPTIDE REPEATS PROTEIN 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTCTTGAGCATGGCCCTCCCGGACGCGACCATGACCATCGCTGCAGGTG
Internal bar code:GCGGATCTTAACCGTAAATATT

Confirmation - LEAP-Seq

LEAP-Seq distance:703
LEAP-Seq percent confirming:3.27869
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:59
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:CCGACAGCTTGTGTTTGGTG
Suggested primer 2:ACGCCATGAGCTATGACCAG