Insertion junction: CLIP2.010755_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.010755
Chromosome:chromosome 12
Location:9211296
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g542950 CGL137,NUP54 Nucleoporin 54; (1 of 1) K14308 - nuclear pore complex protein Nup54 (NUP54, NUP57) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCCGCGACCGTGAAGGCACACGGAGGCAGCAGCACTAGCTGCGCTACCA
Internal bar code:TAAGAGGCGGTACGCCGGTATA

Confirmation - LEAP-Seq

LEAP-Seq distance:2698
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCCTTCAACTTTGGCTCG
Suggested primer 2:GCTCAACCTACAGCACCCTT