Gene: Cre12.g542950
Overview
| Common name: | CGL137,NUP54 |
| Defline: | Nucleoporin 54; (1 of 1) K14308 - nuclear pore complex protein Nup54 (NUP54, NUP57) |
| Description: | 54 kDa Nuclear Pore Complex Protein, conserved in green lineage |
| Synonyms: | CGL137,g13710.t1 |
| Chromosome: | chromosome 12 |
Protein Localization
A plasmid for expressing Cre12.g542950 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre12.g542950-Venus-3xFLAG
Imaged strain: CSI_LW02E3
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
nucleus/nuclear envelope
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.010755_1 | CLIP2.010755 | intron | 80 | 6.1 |
| CLIP2.010755_2 | CLIP2.010755 | intron | 80 | 6.1 |
| CLIP2.011510_1 | CLIP2.011510 | CDS | 80 | 6.1 |
| CLIP2.029039_1 | CLIP2.029039 | intron | 80 | 6.1 |
| CLIP2.029039_2 | CLIP2.029039 | intron | 80 | 6.1 |
| CLIP2.044521_2 | CLIP2.044521 | CDS | 80 | 6.1 |
| CLIP2.062958_1 | CLIP2.062958 | 5'UTR | 80 | 6.1 |
| CLIP2.062958_2 | CLIP2.062958 | 5'UTR | 80 | 6.1 |
| CLIP2.065277_1 | CLIP2.065277 | 3'UTR | 80 | 6.1 |
| CLIP2.065277_2 | CLIP2.065277 | 3'UTR | 80 | 6.1 |
| CLIP2.074584_1 | CLIP2.074584 | intron | 40 | 6.1 |
| LMJ.RY0402.073319_2 | LMJ.RY0402.073319 | 3'UTR | 73 | 5.5 |
| LMJ.RY0402.181847_1 | LMJ.RY0402.181847 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.181847_2 | LMJ.RY0402.181847 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.231713_1 | LMJ.RY0402.231713 | 3'UTR | 73 | 5.5 |
Gene Annotations
| PFAM: | PF13874 |
| PANTHER: | PTHR13000 |
| KEGG_ec: | |
| KEGG_orthology: | |
| KOG: | KOG3091 |
| Gene ontology terms:: | GO:0005643 |
| Best arabidopsis TAIR name: | AT1G24310 |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | (1 of 1) PTHR13000 - NUCLEOPORIN P54 |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.