Insertion junction: CLIP2.011510_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.011510
Chromosome:chromosome 12
Location:9211473
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g542950 CGL137,NUP54 Nucleoporin 54; (1 of 1) K14308 - nuclear pore complex protein Nup54 (NUP54, NUP57) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACATCTTCGGTCAGCCAGCGCAGCAGCCGGGGCAACAAGCCAACATGTTC
Internal bar code:CTTGTCTAATGAGTGGGTGTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2514
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTGAGAGGGAAAACGGAA
Suggested primer 2:CGTGTGTTTGCAGTGAGCTC