Insertion junction: CLIP2.044521_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.044521
Chromosome:chromosome 12
Location:9211830
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g542950 CGL137,NUP54 Nucleoporin 54; (1 of 1) K14308 - nuclear pore complex protein Nup54 (NUP54, NUP57) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTGGTTGCTCCGAAGCCTTGGGTTGGCGCGGTGCCAAACAGGGACGGA
Internal bar code:CTTTTTTTTGGGTTAGGCTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2726
LEAP-Seq percent confirming:82.3529
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:AACTGGGGGATTGGCTAAGC
Suggested primer 2:GGCTGAGAGGGAAAACGGAA